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[Feature] Improve github and youtube channel loader (#966)

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Co-authored-by: Deven Patel <deven298@yahoo.com>
This commit is contained in:
Deshraj Yadav
2023-11-17 18:25:14 -08:00
committed by GitHub
parent 51df00729e
commit 9fcf2130b5
13 changed files with 117 additions and 268 deletions
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13
embedchain/chunkers/base_chunker.py
View File

@@ -1,8 +1,5 @@
import hashlib
from langchain.text_splitter import RecursiveCharacterTextSplitter
from embedchain.config.add_config import ChunkerConfig
from embedchain.helper.json_serializable import JSONSerializable
from embedchain.models.data_type import DataType
@@ -10,15 +7,7 @@ from embedchain.models.data_type import DataType
class BaseChunker(JSONSerializable):
def __init__(self, text_splitter):
"""Initialize the chunker."""
if text_splitter is None:
config = ChunkerConfig(chunk_size=1000, chunk_overlap=0, length_function=len)
self.text_splitter = RecursiveCharacterTextSplitter(
chunk_size=config.chunk_size,
chunk_overlap=config.chunk_overlap,
length_function=config.length_function,
)
else:
self.text_splitter = text_splitter
self.text_splitter = text_splitter
self.data_type = None
def create_chunks(self, loader, src, app_id=None):

22
embedchain/chunkers/common_chunker.py Normal file
View File

@@ -0,0 +1,22 @@
from typing import Optional
from langchain.text_splitter import RecursiveCharacterTextSplitter
from embedchain.chunkers.base_chunker import BaseChunker
from embedchain.config.add_config import ChunkerConfig
from embedchain.helper.json_serializable import register_deserializable
@register_deserializable
class CommonChunker(BaseChunker):
"""Common chunker for all loaders."""
def __init__(self, config: Optional[ChunkerConfig] = None):
if config is None:
config = ChunkerConfig(chunk_size=1000, chunk_overlap=0, length_function=len)
text_splitter = RecursiveCharacterTextSplitter(
chunk_size=config.chunk_size,
chunk_overlap=config.chunk_overlap,
length_function=config.length_function,
)
super().__init__(text_splitter)

4
embedchain/data_formatter/data_formatter.py
View File

@@ -116,8 +116,8 @@ class DataFormatter(JSONSerializable):
DataType.SLACK: "embedchain.chunkers.slack.SlackChunker",
DataType.DISCOURSE: "embedchain.chunkers.discourse.DiscourseChunker",
DataType.SUBSTACK: "embedchain.chunkers.substack.SubstackChunker",
DataType.GITHUB: "embedchain.chunkers.base_chunker.BaseChunker",
DataType.YOUTUBE_CHANNEL: "embedchain.chunkers.base_chunker.BaseChunker",
DataType.GITHUB: "embedchain.chunkers.common_chunker.CommonChunker",
DataType.YOUTUBE_CHANNEL: "embedchain.chunkers.common_chunker.CommonChunker",
}
if data_type in chunker_classes:

104
embedchain/embedder/chroma_embeddings.py
View File

@@ -1,104 +0,0 @@
"""
Note that this file is copied from Chroma repository. We will remove this file once the fix in
ChromaDB's repository.
"""
from typing import Optional
from chromadb.api.types import Documents, Embeddings
class OpenAIEmbeddingFunction:
def __init__(
self,
api_key: Optional[str] = None,
model_name: str = "text-embedding-ada-002",
organization_id: Optional[str] = None,
api_base: Optional[str] = None,
api_type: Optional[str] = None,
api_version: Optional[str] = None,
deployment_id: Optional[str] = None,
):
"""
Initialize the OpenAIEmbeddingFunction.
Args:
api_key (str, optional): Your API key for the OpenAI API. If not
provided, it will raise an error to provide an OpenAI API key.
organization_id(str, optional): The OpenAI organization ID if applicable
model_name (str, optional): The name of the model to use for text
embeddings. Defaults to "text-embedding-ada-002".
api_base (str, optional): The base path for the API. If not provided,
it will use the base path for the OpenAI API. This can be used to
point to a different deployment, such as an Azure deployment.
api_type (str, optional): The type of the API deployment. This can be
used to specify a different deployment, such as 'azure'. If not
provided, it will use the default OpenAI deployment.
api_version (str, optional): The api version for the API. If not provided,
it will use the api version for the OpenAI API. This can be used to
point to a different deployment, such as an Azure deployment.
deployment_id (str, optional): Deployment ID for Azure OpenAI.
"""
try:
import openai
except ImportError:
raise ValueError("The openai python package is not installed. Please install it with `pip install openai`")
if api_key is not None:
openai.api_key = api_key
# If the api key is still not set, raise an error
elif openai.api_key is None:
raise ValueError(
"Please provide an OpenAI API key. You can get one at https://platform.openai.com/account/api-keys"
)
if api_base is not None:
openai.api_base = api_base
if api_version is not None:
openai.api_version = api_version
self._api_type = api_type
if api_type is not None:
openai.api_type = api_type
if organization_id is not None:
openai.organization = organization_id
self._v1 = openai.__version__.startswith("1.")
if self._v1:
if api_type == "azure":
self._client = openai.AzureOpenAI(
api_key=api_key, api_version=api_version, azure_endpoint=api_base
).embeddings
else:
self._client = openai.OpenAI(api_key=api_key, base_url=api_base).embeddings
else:
self._client = openai.Embedding
self._model_name = model_name
self._deployment_id = deployment_id
def __call__(self, input: Documents) -> Embeddings:
# replace newlines, which can negatively affect performance.
input = [t.replace("\n", " ") for t in input]
# Call the OpenAI Embedding API
if self._v1:
embeddings = self._client.create(input=input, model=self._deployment_id or self._model_name).data
# Sort resulting embeddings by index
sorted_embeddings = sorted(embeddings, key=lambda e: e.index) # type: ignore
# Return just the embeddings
return [result.embedding for result in sorted_embeddings]
else:
if self._api_type == "azure":
embeddings = self._client.create(input=input, engine=self._deployment_id or self._model_name)["data"]
else:
embeddings = self._client.create(input=input, model=self._model_name)["data"]
# Sort resulting embeddings by index
sorted_embeddings = sorted(embeddings, key=lambda e: e["index"]) # type: ignore
# Return just the embeddings
return [result["embedding"] for result in sorted_embeddings]

4
embedchain/embedder/openai.py
View File

@@ -1,18 +1,18 @@
import os
from typing import Optional
from chromadb.utils.embedding_functions import OpenAIEmbeddingFunction
from langchain.embeddings import OpenAIEmbeddings
from embedchain.config import BaseEmbedderConfig
from embedchain.embedder.base import BaseEmbedder
from embedchain.models import VectorDimensions
from .chroma_embeddings import OpenAIEmbeddingFunction
class OpenAIEmbedder(BaseEmbedder):
def __init__(self, config: Optional[BaseEmbedderConfig] = None):
super().__init__(config=config)
if self.config.model is None:
self.config.model = "text-embedding-ada-002"

32
embedchain/loaders/github.py
View File

@@ -8,10 +8,35 @@ from tqdm import tqdm
from embedchain.loaders.base_loader import BaseLoader
from embedchain.loaders.json import JSONLoader
from embedchain.loaders.mdx import MdxLoader
from embedchain.loaders.unstructured_file import UnstructuredLoader
from embedchain.utils import detect_datatype
def _load_file_data(path):
data = []
data_content = []
try:
with open(path, "rb") as f:
content = f.read().decode("utf-8")
except Exception as e:
print(f"Error reading file {path}: {e}")
raise ValueError(f"Failed to read file {path}")
meta_data = {}
meta_data["url"] = path
data.append(
{
"content": content,
"meta_data": meta_data,
}
)
data_content.append(content)
doc_id = hashlib.sha256((" ".join(data_content) + path).encode()).hexdigest()
return {
"doc_id": doc_id,
"data": data,
}
class GithubLoader(BaseLoader):
def load_data(self, repo_url):
"""Load data from a git repo."""
@@ -24,7 +49,6 @@ class GithubLoader(BaseLoader):
mdx_loader = MdxLoader()
json_loader = JSONLoader()
unstructured_loader = UnstructuredLoader()
data = []
data_urls = []
@@ -51,7 +75,7 @@ class GithubLoader(BaseLoader):
elif data_type == "json":
data = json_loader.load_data(file_path)
else:
data = unstructured_loader.load_data(file_path)
data = _load_file_data(file_path)
return data.get("data", [])
@@ -64,7 +88,7 @@ class GithubLoader(BaseLoader):
return file_extension[1:] in whitelisted_extensions
def _add_repo_files(repo_path: str):
with concurrent.futures.ThreadPoolExecutor() as executor:
with concurrent.futures.ThreadPoolExecutor(max_workers=4) as executor:
future_to_file = {
executor.submit(_load_file, os.path.join(root, filename)): os.path.join(root, filename)
for root, _, files in os.walk(repo_path)

2
embedchain/loaders/sitemap.py
View File

@@ -53,7 +53,7 @@ class SitemapLoader(BaseLoader):
with concurrent.futures.ThreadPoolExecutor() as executor:
future_to_link = {executor.submit(load_link, link): link for link in links}
for future in tqdm(concurrent.futures.as_completed(future_to_link), total=len(links)):
for future in tqdm(concurrent.futures.as_completed(future_to_link), total=len(links), desc="Loading pages"):
link = future_to_link[future]
try:
data = future.result()

11
embedchain/loaders/youtube_channel.py
View File

@@ -2,6 +2,8 @@ import concurrent.futures
import hashlib
import logging
from tqdm import tqdm
from embedchain.loaders.base_loader import BaseLoader
from embedchain.loaders.youtube_video import YoutubeVideoLoader
@@ -48,11 +50,16 @@ class YoutubeChannelLoader(BaseLoader):
def _add_youtube_channel():
video_links = _get_yt_video_links()
logging.info("Loading videos from youtube channel...")
with concurrent.futures.ThreadPoolExecutor() as executor:
# Submitting all tasks and storing the future object with the video link
future_to_video = {
executor.submit(_load_yt_video, video_link): video_link for video_link in video_links
} # noqa: E501
for future in concurrent.futures.as_completed(future_to_video):
}
for future in tqdm(
concurrent.futures.as_completed(future_to_video), total=len(video_links), desc="Processing videos"
):
video = future_to_video[future]
try:
results = future.result()

8
embedchain/vectordb/chroma.py
View File

@@ -3,6 +3,7 @@ from typing import Any, Dict, List, Optional, Tuple, Union
from chromadb import Collection, QueryResult
from langchain.docstore.document import Document
from tqdm import tqdm
from embedchain.config import ChromaDbConfig
from embedchain.helper.json_serializable import register_deserializable
@@ -157,12 +158,7 @@ class ChromaDB(BaseVectorDB):
" Ids size: {}".format(len(documents), len(metadatas), len(ids))
)
for i in range(0, len(documents), self.BATCH_SIZE):
print(
"Inserting batches from {} to {} in vector database.".format(
i, min(len(documents), i + self.BATCH_SIZE)
)
)
for i in tqdm(range(0, len(documents), self.BATCH_SIZE), desc="Inserting batches in chromadb"):
if skip_embedding:
self.collection.add(
embeddings=embeddings[i : i + self.BATCH_SIZE],

40
embedchain/vectordb/opensearch.py
View File

@@ -1,6 +1,9 @@
import logging
import time
from typing import Dict, List, Optional, Set, Tuple, Union
from tqdm import tqdm
try:
from opensearchpy import OpenSearch
from opensearchpy.helpers import bulk
@@ -23,6 +26,8 @@ class OpenSearchDB(BaseVectorDB):
OpenSearch as vector database
"""
BATCH_SIZE = 100
def __init__(self, config: OpenSearchDBConfig):
"""OpenSearch as vector database.
@@ -131,19 +136,28 @@ class OpenSearchDB(BaseVectorDB):
:type skip_embedding: bool
"""
docs = []
if not skip_embedding:
embeddings = self.embedder.embedding_fn(documents)
for id, text, metadata, embeddings in zip(ids, documents, metadatas, embeddings):
docs.append(
{
"_index": self._get_index(),
"_id": id,
"_source": {"text": text, "metadata": metadata, "embeddings": embeddings},
}
)
bulk(self.client, docs)
self.client.indices.refresh(index=self._get_index())
for i in tqdm(range(0, len(documents), self.BATCH_SIZE), desc="Inserting batches in opensearch"):
if not skip_embedding:
embeddings = self.embedder.embedding_fn(documents[i : i + self.BATCH_SIZE])
docs = []
for id, text, metadata, embeddings in zip(
ids[i : i + self.BATCH_SIZE],
documents[i : i + self.BATCH_SIZE],
metadatas[i : i + self.BATCH_SIZE],
embeddings[i : i + self.BATCH_SIZE],
):
docs.append(
{
"_index": self._get_index(),
"_id": id,
"_source": {"text": text, "metadata": metadata, "embeddings": embeddings},
}
)
bulk(self.client, docs)
self.client.indices.refresh(index=self._get_index())
# Sleep for 0.1 seconds to avoid rate limiting
time.sleep(0.1)
def query(
self,

137
poetry.lock generated
View File

@@ -337,26 +337,6 @@ description = "The uncompromising code formatter."
optional = false
python-versions = ">=3.8"
files = [
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@@ -764,13 +744,13 @@ numpy = "*"
[[package]]
name = "chromadb"
version = "0.4.16"
version = "0.4.17"
description = "Chroma."
optional = false
python-versions = ">=3.8"
files = [
{file = "chromadb-0.4.16-py3-none-any.whl", hash = "sha256:a2e79d80cf25adc5658af568c66949628a8991779d832044a0fabed983b79fc3"},
{file = "chromadb-0.4.16.tar.gz", hash = "sha256:d5fb113ea02f87b969887279aec625e1a2a68bf6acedf1609f95d27670a78dc0"},
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{file = "chromadb-0.4.17.tar.gz", hash = "sha256:120f9d364719b664d5314500f8e6097f0e0b24496bb97a429bc324f8d11f1b52"},
]
[package.dependencies]
@@ -2070,7 +2050,7 @@ files = [
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@@ -2080,6 +2060,7 @@ files = [
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@@ -2792,13 +2773,13 @@ adal = ["adal (>=1.0.2)"]
[[package]]
name = "langchain"
version = "0.0.332"
version = "0.0.336"
description = "Building applications with LLMs through composability"
optional = false
python-versions = ">=3.8.1,<4.0"
files = [
{file = "langchain-0.0.332-py3-none-any.whl", hash = "sha256:4cbf183b8a385483907192efea2f55d34c0f0c441b0a02f41af1eeec4526677c"},
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dataclasses-json = ">=0.5.7,<0.7"
jsonpatch = ">=1.33,<2.0"
langsmith = ">=0.0.52,<0.1.0"
langsmith = ">=0.0.63,<0.1.0"
numpy = ">=1,<2"
pydantic = ">=1,<3"
PyYAML = ">=5.3"
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tenacity = ">=8.1.0,<9.0.0"
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{file = "SQLAlchemy-2.0.22.tar.gz", hash = "sha256:5434cc601aa17570d79e5377f5fd45ff92f9379e2abed0be5e8c2fba8d353d2b"},
]
@@ -7668,4 +7567,4 @@ youtube = ["youtube-transcript-api", "yt_dlp"]
[metadata]
lock-version = "2.0"
python-versions = ">=3.9,<3.12"
content-hash = "58dce9bc5ef9c8d7e77d5fbc3176e24a8facbe89beddbf4c605b9c68e6617b5a"
content-hash = "ea063cadfefd23d4c9b2a25c9096efe6bcedc367136d819ccb1fd2f510a91206"

6
pyproject.toml
View File

@@ -1,6 +1,6 @@
[tool.poetry]
name = "embedchain"
version = "0.1.16"
version = "0.1.17"
description = "Data platform for LLMs - Load, index, retrieve and sync any unstructured data"
authors = [
"Taranjeet Singh <taranjeet@embedchain.ai>",
@@ -90,10 +90,10 @@ color = true
[tool.poetry.dependencies]
python = ">=3.9,<3.12"
python-dotenv = "^1.0.0"
langchain = "^0.0.332"
langchain = "^0.0.336"
requests = "^2.31.0"
openai = ">=1.1.1"
chromadb = "^0.4.16"
chromadb = "^0.4.17"
posthog = "^3.0.2"
tiktoken = { version = "^0.4.0", optional = true }
youtube-transcript-api = { version = "^0.6.1", optional = true }

2
tests/chunkers/test_chunkers.py
View File

@@ -1,3 +1,4 @@
from embedchain.chunkers.common_chunker import CommonChunker
from embedchain.chunkers.discourse import DiscourseChunker
from embedchain.chunkers.docs_site import DocsSiteChunker
from embedchain.chunkers.docx_file import DocxFileChunker
@@ -39,6 +40,7 @@ chunker_common_config = {
PostgresChunker: {"chunk_size": 1000, "chunk_overlap": 0, "length_function": len},
SlackChunker: {"chunk_size": 1000, "chunk_overlap": 0, "length_function": len},
DiscourseChunker: {"chunk_size": 1000, "chunk_overlap": 0, "length_function": len},
CommonChunker: {"chunk_size": 1000, "chunk_overlap": 0, "length_function": len},
}